Study on the relationship between TLR2 and TLR4 polymorphism and CpG island methylation and anti-tuberculosis drug-induced liver injury
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摘要:
目的 研究Toll样受体(Toll-like receptors, TLRs)家族成员中Toll样受体2(Toll-like receptor 2, TLR2)和Toll样受体4(Toll-like receptor 4, TLR4)基因的单核苷酸多态性(single nucleotide polymorphism, SNP)位点rs7656411、rs3804099、rs1927914、rs1927911及TLR2基因启动子区CpG岛(CpG island)甲基化与抗结核药物性肝损伤(anti-tuberculosis drug-related liver injury, ADLI)的关系。 方法 2019年7月―2022年3月在招募的结核病患者中选择322名发生ADLI的患者和322名未发生ADLI的患者分别作为病例组和对照组, 按照性别、年龄和治疗方案进行1∶1匹配。通过甲基化特异性聚合酶链式反应(polymerase chain reaction, PCR)法和聚合酶链式反应-限制性片段长度多态性(PCR-restriction fragment length polymorphism, PCR-RFLP)技术检测基因多态性以及甲基化特征。 结果 ADLI患者中TLR2基因rs3804099位点野生基因型(OR=0.55, 95% CI: 0.31~0.96)、CpG岛甲基化发生率高于对照组(OR=1.81, 95% CI: 1.07~3.06)。多变量分析表明TLR2基因rs3804099位点野生型TT与ADLI疾病进展相关, 野生型TT可能为ADLI的保护因素OR=0.53(95% CI: 0.38~0.75)。此外, TLR2基因CpG岛高甲基化与ADLI的发生风险独立相关[调整OR=1.86(95% CI: 1.05~3.28)]。rs3804099位点突变型和CpG岛高甲基化的交互作用增加了ADLI的发生风险, 为对照组的2.12倍(OR=2.12, 95% CI: 1.36~3.29)。 结论 TLR2基因多态性和CpG岛甲基化与ADLI有关。TLR2基因启动子区CpG岛甲基化与其rs3804099位点基因多态性之间存在交互作用与ADLI的高风险有关。 Abstract:Objective To investigate the relationship between single nucleotide polymorphisms rs7656411, rs3804099, rs1927914, rs1927911 in Toll-like receptor 2 (TLR2) and Toll-like receptor 4 (TLR4) genes, as well as CpG island methylation in the TLR2 gene promoter region, and anti-tuberculosis drug-induced liver injury (ADLI). Methods From July 2019 to March 2022, 322 tuberculosis patients with ADLI and 322 tuberculosis patients without ADLI were selected and matched 1∶1 based on gender, age, and treatment regimen. Gene polymorphisms and methylation patterns were detected using methylation-specific polymerase chain reaction(PCR) and PCR-restriction fragment length polymorphism(PCR-RFLP) technique. Results The wild-type genotype of TLR2 gene rs3804099 site (OR=0.55, 95% CI: 0.31-0.96) and CpG island methylation rate (OR=1.81, 95% CI: 1.07-3.06) were significantly higher in ADLI patients than in the control group (P < 0.05), with no statistical difference in the genotype frequency of other polymorphic sites between the two groups. Multivariate analysis showed that the wild-type TT of TLR2 gene rs3804099 site was associated with the progression of ADLI, and the wild-type TT may be a protective factor for ADLI OR=0.53 (95% CI: 0.38-0.75). In addition, high methylation of CpG island in TLR2 gene was independently associated with the risk of ADLI, with adjusted OR of 1.86 (95% CI: 1.05-3.28). The interaction between the mutation of rs3804099 site and high methylation of CpG island increased the risk of ADLI, being 2.12 times that of the control group (OR=2.12, 95% CI: 1.36-3.29). Conclusions There is an association between TLR2 gene polymorphism and CpG island methylation and ADLI. The interaction between CpG island methylation in the TLR2 gene promoter region and the gene polymorphism at rs3804099 is associated with a high risk of ADLI. -
Key words:
- Gene polymorphisms /
- Anti-tuberculosis drugs /
- Liver injury /
- Methylation
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图 1 各基因相关位点酶切电泳图
M: DNA marker; A: rs3804099位点; B: rs7656411位点; C: rs1927911位点; D: rs1927914位点。
Figure 1. Electrophoresis of enzyme digestion at each gene related site, based on enzyme after electrophoresis gel bands in the location and the number of rs3804099, rs7656411, rs1927911, rs1927914 loci genotyping
图 2 TLR2基因MSP扩增产物电泳图
M: DNA marker; TLR2: Toll样受体2; 1, 2: 部分甲基化; 3, 4: 高甲基化; 5, 6: 低甲基化。
Figure 2. Electrophoresis of enzyme digestion at each gene related site, based on enzyme after electrophoresis gel bands in the location and the number of rs3804099, rs7656411, rs1927911, rs1927914 loci genotyping
表 1 ADLI一般影响因素的单因素条件logistic回归分析结果
Table 1. Univariate logistic regression analysis of the general influencing factors (variables include marital status, occupation, smoking, education, Low density lipoprotein cholesterol, triglyceride, blood sugar) of antituberculosis drug-induced liver injury
影响因素 病例组 对照组 χ2/t值① P值① OR值(95% CI)① 影响因素 病例组 对照组 χ2/t值① P值① OR值(95% CI)① 婚姻状况 吸烟 未婚 96 91 1.00 否 238 254 1.00 已婚 226 231 0.322 0.570 0.28(0.14~1.52) 是 84 68 2.623 0.105 1.32(0.91~1.90) 职业 城乡居住地 其他 38 47 1.00 城市 90 81 1.00 工人 70 74 4.383 0.223 1.17(0.68~2.00) 乡村 232 242 0.147 0.701 1.07(0.74~1.54) 农民 155 160 3.20(0.74~4.94) 受教育情况 学生 59 41 2.78(0.99~3.19) 高中及以上 48 51 1.00 BMI/(kg·m-2) 初中 116 110 0.278 0.870 2.12(0.70~2.80) < 18.5 135 121 1.00 小学及以下 158 161 0.94(0.66~1.64) ≥18.5 187 201 1.754 0.185 0.83(0.61~1.14) 低密度脂蛋白胆固醇/(mmol·L-1) 2.73±0.65 2.49±0.57 4.982 < 0.001 饮酒 三酰甘油/(mmol·L-1) 1.62±0.98 1.49±0.89 1.762 0.079 否 220 257 1.00 血糖/(mmol·L-1) 5.50±1.03 5.52±1.32 0.214 0.830 是 102 65 10.569 < 0.001 1.85(1.29~2.65) 注:ADLI, 抗结核药物性肝损伤。
①病例组和对照组配对后统计分析得到的结果。表 2 两组TLR2基因和TLR4基因多态性分布比较
Table 2. The distribution of four SNP genotypes and alleles of TLR2 gene and TLR4 gene between the case group and the control group, and the statistical analysis results
基因 位点 类型 指标 病例组 对照组 χ2值① P值① OR值(95% CI) TLR2 rs7656411 基因型 TT 157 148 3.247 0.072 0.56(0.33~1.05) GT 134 145 0.262 0.609 0.86(0.49~1.51) GG 31 29 1.00 等位基因 T 448 441 0.178 0.673 1.05(0.75~1.47) G 196 203 1.00 rs3804099 基因型 TT 115 138 5.261 0.022 0.55(0.31~0.96) CT 147 145 3.126 0.077 0.66(0.41~1.05) CC 60 39 1.00 等位基因 T 377 421 6.377 0.012 0.75(0.64~0.88) C 267 223 1.00 TLR4 rs1927914 基因型 GG 146 136 2.453 0.117 0.63(0.36~1.22) GA 150 145 3.169 0.075 1.63(0.95~2.80) AA 26 41 1.00 等位基因 G 442 417 2.184 0.139 1.19(0.67~2.11) A 202 227 1.00 rs1927911 基因型 AA 145 137 2.782 0.095 0.85(0.37~1.09) AG 142 153 0.368 0.544 0.85(0.50~1.44) GG 35 32 1.00 等位基因 A 432 427 0.087 0.768 1.04(0.77~1.40) G 212 217 1.00 注:TLR2, Toll样受体2; TLR4, Toll样受体4。
①病例组和对照组配对后统计分析得到的结果。表 3 TLR2基因启动子区CpG岛甲基化情况在病例和对照中的分布
Table 3. Relationship between CpG island methylation in promoter region of TLR2 gene and anti-tuberculosis drug induced liver injury
对照组 病例组 χ2值 P值 OR值(95% CI) 高甲基化 低甲基化 高甲基化 10 21 4.898 0.026 1.81(1.07~3.06) 低甲基化 38 253 合计 48 274 注:TLR2, Toll样受体2。 表 4 基于基因多态性ADLI影响因素的多因素条件logistic回归分析
Table 4. Multivariate logistic regression analysis was based on ADLI influencing factors (variables included alcohol consumption, low density lipoprotein cholesterol, TT type at rs3804099, hypermethylation)
因素 β值 sx Wald χ2值 P值 OR值(95% CI) 饮酒(对照组:不饮酒) 0.536 0.395 8.986 0.003 1.71(1.11~2.64) 低密度脂蛋白胆固醇 0.211 0.526 2.254 0.133 1.23(0.41~3.68) rs3804099位点TT型(对照组:rs3804099位点CC型) -0.634 0.629 4.789 0.029 0.53(0.38~0.75) 高甲基化(对照组:低甲基化) 0.621 0.747 7.396 0.007 1.86(1.05~3.28) 注:ADLI, 抗结核药物性肝损伤。 表 5 TLR2基因启动子区CpG岛甲基化与其基因多态位点的交互作用分析
Table 5. Analysis of interaction between methylation of CpG island in promoter region of TLR2 gene and its polymorphic sites
基因多态性 甲基化水平 β值 χ2值 P值 OR值(95% CI) TT 低 1.00 CC+CT 低 0.148 1.945 0.163 1.16(0.35~3.82) TT 高 0.207 2.478 0.115 1.23(0.32~4.76) CC+CT 高 0.751 5.631 0.018 2.12(1.36~3.29) 注:TLR2, Toll样受体2。 -
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